The rise times in the speed jump simulations are shorter than those in the density jump simulations.
The solar wind velocity in the speed jump simulations is higher than that in the density jump simulations.
Therefore, the rise times in the speed jump simulations are shorter than those in the density jump simulations.
In both the speed jump and density jump simulations, the PI amplitude increases as the PI rise time decreases.
The rise time of the PI is at most 90 s, while the rise time of the DL is at least 1.5 9 min. We can estimate the effective length of the PI from the product of the solar wind velocity and the rise time in our simulation results, which is ~3.5 Re from the speed jump simulations.
But it features a fantastic ski-jump simulation, where you actually stand on the board and push off at the moment of truth, hoping not to end up like the poor "agony of defeat" guy from ABC's "Wide World of Sports".
To interpret the model states structurally, 200 ns of molecular dynamics, including six temperature-jump simulations, were run.
To test whether the observed patterns are compatible with ecosystem mutation/migration/extinction models, we developed jump diffusion simulations to integrate Fickian diffusion of mutating species across 2D and 3D lattices.
To account for the damping effect of water molecules on the mechanical response of a stretched peptide especially in beginning of the jump-ramp SMD simulation, we also used Langevin equation to model the stretching process [25].
In the following, in analogy to a temperature jump experiment, MD simulations of the TRPZ1 peptide with explicit treatment of the solvent have been performed raising the temperatures of the system at values above 373 K.
All the variables of interest, including the Bayes factors for model selection, the posterior distributions of model parameters, and the averaged results of system responses are obtained by one reversible jump Markov chain Monte Carlo simulation.
