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D-zone disk diffusion tests were performed on all S. aureus isolates according to previously described techniques [13].
Antimicrobial susceptibility test was performed for all S. aureus isolates according to the criteria of the Clinical and Laboratory Standards Institute (CLSI 2008).
We ranked the bacterial pathogenic isolates according to frequency.
Panton Valentine leukocidin (PVL) detection was performed on all MRSA isolates according to a previous published protocol [24].
Cluster 2 isolates were all E. hormaechei isolates according to rpoB, but E. hormaechei steigerwaltii and E. hormaechei oharae according to hsp60 genotyping.
We identified Brucella spp. isolates according to morphologic characteristics, microscopic appearance, and reactions with positive sera.
Chromosomal fingerprinting using PFGE was performed on selected Shigella isolates according to Pulse Net protocols [ 25].
pneumoniae isolates according to serotype/subtype is shown in Table 1 and Figure 1.
These were present in different E. coli isolates according to the phylogenetic typing.
There was no clear grouping among the 20 isolates according to their geographical origin.
All of the positive ESBL isolates according to phenotypic assays (n = 100) were further confirmed by PCR and sequencing.
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