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It is a likelihood method, whose originality is in modeling the frequencies of haplotypes comprising one trait locus and two flanking markers.
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The second method is a likelihood-based method that has been described previously (28).
The scan statistic is a likelihood ratio based method, which Kulldorff [ 11] defined without any assumptions about the shape, size or collection of locations for the scanning windows.
The phase of the paternally and maternally inherited chromosomes was constructed using gdqtl software (B. Guldbrandtsen, personal communication), which is a likelihood-based method developed for granddaughter design QTL studies.
Poisson regression is a likelihood-based method for the quantitative analysis of such records or 'event-time tables', 40 whereby the rates to be modelled are computed as the ratios of prostate cancer cases to person-years for each record in the input data set.
The parameter estimation method is a maximum likelihood method (ML) where the likelihood function is evaluated using a Kalman filter technique.
The bias correction algorithm is a maximum likelihood method.
The other one is a maximum likelihood method (α ML ), which requires a tree.
The Cox Regression is a partial likelihood method of estimation which takes into account the number and rank order of deaths in the sample.
It is a maximum likelihood method for inferring positive selection in non-coding regions, by comparing non-coding divergence vs. synonymous divergence.
The cut-off 3.5 ng/mL was selected using a likelihood method as previously described [ 29].
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