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We analyzed the consensus reads with a standard pipeline that involves read alignment with BWA, post-processing of the alignments with GATK indel realigner, GATK base quality score recalibrator (BQSR), GATK base alignment quality (BAQ) computation [ 26], and trimming of the primer bases using custom scripts.
We analyzed the simulated reads with a standard pipeline that involves read alignment with BWA [ 6, 7], post-processing of the alignments with GATK indel realigner, GATK base quality score recalibrator (BQSR), and GATK base alignment quality (BAQ) computation [ 8], trimming of the residual primer bases using custom scripts, and variant calling with GATK Unified Genotyper [ 9].
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Okay, so any app that involves reading the news is a publishing app.
At its simplest level, it involves reading electrical signals into a computer from some form of sensor.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com