Sentence examples for investigated using the program from inspiring English sources

Population structure was investigated using the program STRUCTURE version 2.1 [20] with an admixture model.

Presence of first generation migrants in post-epidemic samples was investigated using the program GeneClass2 [88].

Nucleotide composition and synonymous codon usage of protein coding genes were investigated using the program INCA2.0 by [ 68].

After we detected nonsynonymous SNPs or InDels, the potential functional change in the protein was investigated using the programs POLYPHEN [ 64] and SIFT [ 65].

In the present paper, the constitutional liquation in the Al Cu system was computationally investigated using the DICTRA program coupled with critically assessed thermodynamic and kinetic databases.

Lastly, the TM segments of the BceS and BceB homologues were investigated using the filter_tmhmmv2.pl program (C. Brochier-Armanet., unpublished).

The involvement the four histidine residues in CtxB5, His 13, His 18, His 57 and His 94 in the reassembly of CtxB was further investigated using the Simulation Diffusional Association SDAA) program.

To identify the HSE, the promoter sequences of CmsHSP1 and CmsHSP2 were investigated using the TFBIND program (Tsunoda and Takagi 1999) to predict TATA boxes and HSEs.

A sliding window of 150 bases of genomic sequences surrounding each putative miRNAs were retrieved and its ability to fold into a potential miRNA hairpin precursor was investigated using the RNA fold program [ 35] and/or the MiRAlign program [ 36]).

On the basis of in-situ stratification-cracking blasting tests, the properties of weak intercalation were investigated using the LS-DYNA3D program.

The population structures of the collection were investigated using the model-based program STRUCTURE v2.3.4 (Pritchard et al. 2000) with a burn-in period length of 100,000 and a Markov chain Monte Carlo (MCMC) rep number of 200,000, which implements a Bayesian approach to identify subpopulations with distinct allelic frequencies and places individuals into K clusters.