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A 20 bp inverted repeat (IRR2) that matched the left inverted repeat of ISEcp1 (IRL) better than the right inverted repeat was found next to the IS903 (IRR1, Fig. 4).
BLAST hits for the NUPTs found within inverted repeat regions of the chloroplast genome were obtained in both inverted repeat regions and could not be distinguished.
Long inverted repeat explorer (Lirex) was developed and introduced in this report.
All three gene pairs have inverted repeat structures (panel A).
Each insertion consists of 5.3 kb terminal inverted repeat arms separated by a 4 kb spacer.
Both elements share 11-bp terminal inverted repeat sequences (TIRs).
Intergenic regions of prokaryotic genomes carry multiple copies of terminal inverted repeat (TIR) sequences, the nonautonomous miniature inverted-repeat transposable element (MITE).
IR = inverted repeat region; SSC = small single-copy region; LSC = large single-copy region.
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This was accomplished for the miniature inverted-repeat TE (MITE) mPing from rice5,6.
Inverted-repeat RNAs targeting FT intronic regions promote FT expression in Arabidopsis.
commercial plant material based on mapped miniature inverted-repeat transposable elements.
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