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The visualization of flux distributions is a necessary prerequisite for intuitive flux data exploration in the context of metabolic networks.
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This model provides intuitive prediction of flux recovery as a function of cleaning time and cleaning solution concentration for PAN microfiltration membrane fouled with activated sludge from membrane bioreactor (MBR).
Firstly, images are a convenient way of communicating information to the scientist and, secondly, visual analysis of network-associated fluxes is intuitive for the user.
The interactive parameter analysis supports a fast and intuitive understanding of the simulated flux data, allowing insights into metabolic and physiological changes of metabolism in response to varying genetic and/or environmental conditions.
First, since enzymes influence the reaction speed, metabolically driven correlations are more intuitive between transcripts and metabolite fluxes than for the more easily measured abundances.
Our approach is very intuitive and structurally reminiscent to ordinary flux balance analysis.
The aim of CBFA is to provide the community with a tool to perform flux analysis tasks that is simple, intuitive and with high usability.
For the nondegenerate three-wave case, we present an intuitive picture for a parametric amplifier containing a flux-pumped SQUID where current at the signal frequency depends upon the load impedance at an idler frequency.
This simple relationship emerges numerically from flux balance analysis, but it also has a straightforward intuitive explanation.
Downstream and substrate-competing enzymes are less tractable to an intuitive interpretation, and likely require metabolite quantification to more precisely assess flux before considering their role as candidate genes.
While it may seem intuitive that CO2 emission are likely to increase along with the magma flux, such a relation critically depends on details of the melt extraction process.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com