Sentence examples for interrogate against from inspiring English sources

Here we also employed these S. japonicum miRNA precursors to interrogate against draft S. mansoni genome (http://www.genedb.org/genedb/smansoni/index.jsp) by homologous comparison.

Spectra were interrogated against the Swissprot database and quantified using the ProteinProspector software.

The raw MS/MS data were directly interrogated against the EST data set using Mascot software.

Gene lists were then interrogated against the ChIP-seq compendium using both GSCA and C-GSCA.

Upon choosing GSCA, a gene list of interest is interrogated against 78 ChIP-Seq datasets across 15 blood cell types.

These additional cases were interrogated against 53,806 MRU PCR-negative reports and 1465 (52%%) matched to a PCR-negative result (HES+/MRU- cases).

In this study, each query sequence was divided by a sliding window into K-mers and each K-mer was interrogated against the Bloom filter.

The expression profiles of matching gene loci with at least 100 bp overlap and ≥ 98% sequence identity were selected and then interrogated against our DGE dataset.

Unigenes were first interrogated against the NCBI nr protein database using a blastx e-value threshold of 1e-10, keeping the top 10 high scoring alignments, resulting in 34,740 unigenes (61.8%) with positive blast hits.

These peak lists were then interrogated against all rodent entries in the Swiss-Prot database using Mascot Daemon software v 2.2.2 (Matrix Science, London, UK) using an in-house Mascot server (v 2.2).

Thus, in the present study, the glycopeptide dataset was interrogated against the UniProt database supplemented by randomized sequences, and the performance of two different versions of the search engine Protein Prospector was compared.