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They presented the biophysical interpretation of the networks along with stability analysis of their dynamics.
Consequently, the interpretation of the networks remains subjective.
In the meantime, it is important to provide additional user-friendly graphical layouts of the networks, such as the ones presented herein, to enable the reader to scrutinize the authors' detailed interpretation of the networks.
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We convert our initial interpretation of the network clusters into quantifiable hypotheses, which we express through transition probability matrices illustrated in Figure 3.
This reticulate structure complicates interpretation of the network; however, outgroup rooting clearly split the network into two large groups strongly associated with the two major O. sativa varietal groups, JAPONICA (tropical japonica, temperate japonica, aromatic) and INDICA (indica, aus), referred to as cpGroup I (or the JAPONICA-cpGroup) and cpGroup VIII (or the INDICA-cpGroup), respectively.
The choice of these groupings was made to facilitate the biological interpretation of the network.
The functional interpretation of the network level interactions that underlie moral sensitivity and differentiate information processing for care and justice moral issues is based on selective functional attributes for the component brain regions.
AS and EJvZ contributed to experimental set-ups, measurements and biological interpretation of the network.
While unlikely to greatly affect interpretation of the network in the current study, such missing haplotypes can obscure real patterns and so must be considered while interpreting networks.
The PC algorithm (Kalisch and Bühlmann, 2007; Spirtes et al., 2000) allows to define the direction of some edges allowing for a causal interpretation of the network.
These evolutionarily conserved pathways allow interpretation of the network of a poorly understood organism based on its similarity to that of a well-known species.
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