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The availability of two complete P sequences allowed the evaluation of the internal divergence of P (0.00033±0.00010 substitutions per site), which corresponds to a coalescence time of 16.0±4.7 ky (Figure 2).
The IS 4 family is composed of ~70 elements and, like some other families, displays extremely elevated levels of internal divergence impeding its classification.
The age estimation of genus Hoffmannseggella is based on a single, secondary calibration point (the crown group age of 'Higher Epidendroids' obtained in the high-level dating analysis), which should have a direct effect on all internal divergence times.
To determine divergent DNA recognition motifs of CTCF in various functional genomics contexts, we developed a novel motif discovery workflow focusing on the balance between the number of sequences a motif represents and the internal divergence within the sequence subgroups.
Island populations predominantly sorted into clusters with under 0.5% internal divergence, but higher intra-island divergence, up to 3.1%, occurred in four species (H. anthracinus, H. crabronoides, H. flavipes, and H. specularis).
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In this literature, local governments are usually taken as a totality without internal divergences (Chen 2002).
Branches with exclusive CBC support (red branches in Figure 2) represented eight terminal branches as well as four internal divergences.
The focus of the study was the internal divergences in Squamata, and they therefore chose to use the oldest known rhynchocephalian fossil to fix the most recent common ancestor of Squamata and Rhynchocephalia to 227 Mya.
Our results of internal contribution divergence among KAK, HON, and SJG stations are mostly coincident with the lateral inhomogeneity of conductivity distribution under these stations.
In total 14 fossils were used to specify informative priors on internal node divergence times.
More comprehensive taxa sampling for both Rhizaria and stramenopiles, particularly for early diverging species (e.g. radiolarians), is likely to shed light on the internal order of divergence within SAR.
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