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Interactive alignments for a suite of catalytic-core TyrA domains of differing specificity are also provided to facilitate phylogenetic analysis.
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jip-align (a.k.a. align) is an interactive alignment and display package.
For interactive alignment of genome sequences, BLAST26 was performed by ViroBLAST26, an independent web server for flexible queries of similar nucleotide and amino acid sequences.
Second, we devise an interactive alignment algorithm for matching latent topics from multiple models, and enable sensitivity evaluation across a large number of models.
Interactive alignment occurs via automatic alignment channels that are functionally similar to the automatic links between perception and behaviour (the so-called perception behaviour expressway) proposed in recent accounts of social interaction.
Pickering and Garrod (2004 21) state that their model of interactive alignment "challenges linguists to come up with a more flexible account of grammar capable of capturing linguistic constraints on linked sentence fragments".
XCAT phantoms were then generated based on these MRI data by interactive alignment of the organ contours of the XCAT with the MRI slices using a graphical user interface.
These resources are dynamic in the sense that they are augmented as interactive alignment proceeds.
A fully annotated and interactive alignment file is provided in Additional file 4: File S1.
Allows the assessment and modification of the alignments via our interactive alignment editor MODalign (Barbato et al., 2012 ).
The interactive alignment viewer displays each computed read alignment and colors the mappings according to their mapping quality.
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