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P values for interactions were derived from Wald tests.
Protein-DNA interactions were derived from a previously published study [ 72].
The protein protein interactions and genetic interactions were derived from the BioGRID release 3.2.97 (http://thebiogrid.org/).org/
The reason for including bacterial species for the analysis was that many interactions were derived from predicted operons of bacteria.
The edges are annotated with details about the publication or data source the interactions were derived from.
A few interactors (Supplementary Table 5) have only PDB accessions as their primary IDs since their interactions were derived from crystal structures.
Similar(48)
With a majority of previously reported interactions being derived from BioGRID (release 3.4.142) the table contains the BioGRID-specifc identifiers such as BioGRID interaction and organism ID.
Here, a new interatomic potential that explicitly accounts for these interactions is derived from quantum-mechanical calculations.
Intermolecular interactions are derived from the behavior of pairs of molecules of propane in the gas phase.
The interactions are derived from different information sources and different organisms, whereas the interactions include physical and functional associations.
Secondary interactions are derived from the interactions of the genes identified as interactors of the initial focal gene.
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