Sentence examples for interactions file from inspiring English sources
To this end we downloaded from CTD the chemicals genes interactions file (http://ctdbase.org/reports/CTD_chem_gene_ixns.csv.gz, accessed 30.11.13) and we constructed a bipartite network.
The genetic interaction data set was processed by retaining only those entries in the interactions file that are denoted as 'Manual curation' and of type 'Synthetic Lethality' or 'Synthetic growth defect'.
Human protein interactions were derived from multiple sources: BioGRID http://www.thebiogrid.org, BIND http://www.bind.ca and HPRD http://www.hprd.org and filtered from the NCBI "interactions" file ftp://ftp.ncbi.nlm.nih.gov/gene/GeneRIF.nih.gov/gene/GeneRIF
We predict 67% of the pairs with a STRING score > 800/1000 but only 46% of the pairs with a STRING score > 200/1000, showing that our method is mostly capturing physical interactions (File S8).
The American Civil Liberties Union of Illinois, arguing that Illinois's statute violates the First Amendment and would keep the organization's members from monitoring citizen-police interactions, filed a lawsuit in 2010 challenging the law.
The best FDR-corrected P-values for interaction (File S7) were 0.014 (ISCU expression, gender and rs4830487) and the second one was 0.042 (HIST1H2AE expression, smoking and rs16891378).
This tool also generates an interaction file for each type of interactions.
GenomicInteractions has a built-in function to import data from the HOMER interaction file format.
Protein interaction file has been downloaded from the NCBI ftp site.
In the interaction file downloaded from KEGG, only the PPrel (protein-protein interaction) and GErel (gene expression interaction) were extracted and added to this study.
It has been shown that conditions of high illumination or unfamiliarity with the arena suppress social interaction behavior (File and Hyde 1978), whereas anxiolytics such as benzodiazepines increase social interaction (File 1980).
