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In the functional protein association network, the interaction unit consists of two nodes (proteins) and an edge between them.
The average path length (AL) of the entire hypergraph is the path length between each of two nodes, averaged over all pairs of nodes.
The intersection of two nodes is all shared interactions between the two nodes, with the union of the two nodes being all the nodes that interact with at least one of the nodes of interest.
The result is a focus network of all identified paths of a certain length between two nodes.
The minimum path length between two nodes is the minimum number of edges that must be traversed to get from one node to the other.
An increase in the path length between two nodes a and b upon removal of a node c indicates that the node c lies on the path between nodes a and b.
We have a three-message length reception buffer and a neighbourhood of five nodes.
The shortest path length (L) between two nodes was defined as the minimum number of intermediate nodes that must be traversed to go from one node to another [ 23].
The length of an edge (branch length) connecting two nodes (species) in the tree represents the amount of evolutionary time (divergence) between the two species.
For a given subset of nodes, we defined its characteristic path length as the average shortest path length between any two nodes of the set.
Here, the average distance is set as the equilibrium length of a spring between two nodes.
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CEO of Professional Science Editing for Scientists @ prosciediting.com