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We used this published interaction information to determine whether our smoking-correlated expression signatures are tightly connected at the molecular level.
We also used the AtGenExpress data [ 40] in combination with the protein interaction information to extract protein sets in tetramer-like subgraphs for which the encoding genes are jointly expressed in at least one Arabidopsis tissue.
In future work, we could use different microarray data about the cancers to test our methods and integrate further the protein-protein interaction information to construct a more complete gene and protein networks.
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Other recent schemes that exploit the cross-layer interaction information try to deal with congestion control problem in decentralized CRNs from a cross-layer design perspective.
First, a network is built including all ortholog genes together with interaction information according to annotation.
After calculating the phase, the phase interaction information needs to be extracted.
Structural interaction information tends to provide more number of predictions as many specifically different sequences share the same structure.
Several algorithms have been designed in recent years which use interaction information alone to identify functional modules and complexes.
The results demonstrate that the PAI is independent of LD and the interaction information related to the QT is retained.
These methods employ a variety of techniques and data, including evolutionary information, structural templates and protein interaction network information, to predict whether sets of proteins interact [ 14].
Genotype by environment interaction information may help to define genomic regions relevant to disease risk.
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