In their model the computation is achieved using only a fixed interaction, ancilla preparation in a fixed state, and measurement in the computational basis.
We now know that accelerated hydrolysis of GTP in Irga6 oligomers in vitro also occurs through reciprocal G-domain G-domain interactions (Pawlowski et al, in preparation).
Prdm14, which binds predominantly to distal regulatory elements (Ma et al., 2011), might also be important for priming by inducing a permissive state in enhancers in preparation for interaction with the cognate promoters.
In turn, in membranes expressing the dopamine transporter, DAT, this phosphorylation event appears to affect direct STX/DAT interactions (ref (7) and Galli, in preparation) that are important for regulation of AMPH-mediated reverse transport of DA (efflux) through the DAT.
Then, it is interesting to examine the interaction of ethanol as impregnation medium in preparation of Ni/MgAl2O4 CeO2 catalysts.
Variation Ontology (VariO, http://variationontology.org/) has been developed for systematic description and annotation of variation effects and consequences on DNA, RNA and/or protein including variation type, structure, function, interactions, properties and other features (Vihinen, in preparation).
Two recent studies showed the beneficial effect of APC on microvascular perfusion and leucocyte-endothelium interaction in the dorsal skinfold chamber preparation of hamsters and in rat mesentery during experimental endotoxaemia [ 12, 13].
In preparation for computing conserved protein interaction modules, we computed orthologous pairs of proteins in every pair of pathogens.
When tested independently (data not shown) we found a significant interaction between barbeque preparation and smoke exposure, so it was retained in the final model.
A recent assembly of structural data on antibody-antigen interactions supports the early conjectures cited above (manuscript in preparation).
By simulations using degree-preserving random networks, we created the SCP network by retaining only the significant interactions (P ≤ 0.001; T.M. Venancio et al., manuscript in preparation).
