Sentence examples for instead of alignment from inspiring English sources

For gene-specific probes the same definition was used with respect to alignments to transcript sequences of one gene (instead of alignment to one transcript).

The OMA algorithm also displays advantages over RBH, corroborated in both Experiments 1 and 2. It uses evolutionary distances instead of alignment scores.

The use of these methods instead of alignment methods or the classic known clustering methods by biologists can improve the clustering sensitivity and specificity and reduce significantly the computational time.

To improve the quality of the alignments we used multiple sequence alignment instead of pairwise alignment, aligning the sequences in 21,969 groups of 40 sequences.

Instead of alignments, various descriptors are extracted from each sequence (e.g., amino acid composition, dipeptide frequencies, and physico-chemical properties), and pattern recognition or multivariate statistical methods are trained to discriminate positive protein samples from negative samples.

Multiple sequence alignment (MSA) can be seen as a generalization of pair-wise sequence alignment, in which, instead of aligning two sequences, k sequences are aligned simultaneously.

Based on multiple alignments instead of pairwise alignments, our RNAz-based approach has a significantly increased sensitivity and specificity.

Since the alignment score largely depends on the protein length, we used the percentage identity for protein sequences, instead of the alignment scores.

The above I-V characteristic curves suggest that the rectifying behaviors in the Si NW-based devices were produced in the process of the electrical measurement instead of DEP alignment.

To measure the conservation of proteins, we find orthologous proteins in other species, instead of sequence alignment using BLAST.

That is, it is a haplotype-based caller that identifies variants based on the sequence of the reads themselves instead of the alignment, the latter of which is how GATK's UnifiedGenotyper operates.