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For each gene region of interest, we execute an independent PHLAWD instance to generate a single-gene MSA.
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In general, we combine an UFLP instance with an STP instance, to generate ConFL input graphs in the following way: first ˈ F ˈ nodes of the STP instance are selected as potential facility locations, and the node with index 1 is selected as the root.
For instance, DPN was used to generate a pattern of circular features (150 nm in diameter) that presented thiol-reactive maleimide groups at low density among penta- ethylene glycol) groupenta- ethylene
For instance, if the goal is to generate a rank-ordered list of promising candidates genes that might causally affect a phenotype of interest and the biologist can easily validate several genes, a larger list generated by more powered and less precise methods might be more appealing.
For instance, it is mentioned that "To generate a dependable, SD-mediated set of pause sites, we filtered out pause codons for which we could not identify an upstream SD-like element", however it is not clear what was the number (or percentage of total) of the filtered-out codons.
Clearly we also need a tool, like Modisco, to generate a KDM instance from C++ applications.
Because the final correlations used to assess gene coordination were bootstrapped, to detrend the data we removed any linear relationship with age in each of the 20,000 bootstrap instances and used these detrended resamples to generate a histogram of amygdala-cingulate expression profiles as before (see Figure 2A).
KSEs computed for many randomized instances of the dataset are employed to generate a null distribution and establish a (multiple testing corrected) significance threshold (p = 0.05, Figure 1).
To generate an instance of the execution rule template, the rule instance generator replaces: In rd operation, Objectname and id by the technology and the id of the corresponding sensor; In put operation, Objectname and id by the technology and the id of the corresponding actuator.
The two solutions were then compared to generate an instance of AP.
Finally, a teacher may guide students to compare two solutions to generate an instance of the AP, (3 × 2) × 5 = 3 × (2 × 5), which may lead to further generalization of the algebraic formula, (ab c = a bc).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com