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As the level of information from MS studies is specific instance of subclass (e.g., 1-octadecanoyl-2-dodecanoyl-sn-glycero-3-phosphocholine) and not the common sub class itself (e.g., 1-acyl-2-acyl-sn-glycero-3-phosphocholine), a mechanism is necessary to convert generic enzymatic and pathway information from KEGG database to a specific instance under study.
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This means that each instance of the subclass contains not only the instance fields and methods defined in it but also the instance fields and methods defined in an inherited by the superclass.
In Mordred, when the result is a missing value, an instance of the subclass MissingValueBase is returned.
For all tasks that require knowledge about the certain distribution strategy every distributed_data_object possesses an instance of a d2o.distributor subclass.
Using SO, one annotates a feature by assigning it an instance of one of the subclasses of sequence_attribute.
This is the case for instance of the truncated-globin subclasses, wherein the GLB_TRO profile recruits GLB_TRP sequences (additional file 2).
To access the data it is necessary to 'downcast' an instance of OBGenericData to the specific subclass.
Using our implemented object system, we will create an Account class, a CheckingAccount subclass, and an instance of each.
A shared slot is defined to be a slot that is visible to more than one instance of a given class and its subclasses.
In other words, a ribose residue is an instance of a substructure "C1b(O2b)-C1y(O2x)-C1y(O1a)-C1y(O1a)-C1y(N1y+O2x)", which is a subclass of SKELETON.
For instance, an important subclass of these enzymes known as the disaggregases can separate proteins that have formed aggregates within the cell: this allows these proteins to refold with assistance from chaperone proteins.
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