Sentence examples for inspecting the network from inspiring English sources
By inspecting the network topology, we identified the most significant threshold that resulted in a network that was the most different from what was expected by chance.
Inspecting the network, we found that ranking the nodes by degree resulted in enrichment of rapamycin driver genes (Fig. 4a and b).
In networks involving few nodes, modules can easily be identified by inspecting the network, but for large networks involving hundred of nodes, it is useful to generate a topological overlap matrix (TOM) plot, which we review in the following.
This compression ratio is spectacular, as it is now much easier to visually inspect the network in which we can highlight the metabolites of interest.
Inspecting the entire network allowed us to gain insights into potential sources of variation, which could not have been achieved by an isolated look at just one set of trials comparing only two stent types.
We visually inspected the treatment network to identify missing comparisons.
By inspecting the hub proteins of each network and comparing significant changes in the number of linkages between the two PPI networks, we identified TGF-β signaling and apoptosis as two of the main functional modules involved in primary and secondary infection.
To further analyse the correlation results, we visually inspect the team networks.
For visualization and analytical purposes, we used Cytoscape (Shannon et al., 2003), which is a software for network visualization, enriched with a plug-in we developed to enable loading, visualizing and inspecting the three aforementioned objects (compressed networks, stories, anthologies) inside Cytoscape.
