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Mixing was monitored by observing effective sample size (ESS) values and inspecting parameter plots for trends.
Convergence of the MCMC runs on the posterior distribution was assessed by inspecting parameter trends and effective sample sizes using Tracer version 1.5 (Rambaut and Drummond 2007).
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Inspect anyway.
To finish we run mkexpmap and then dmstat on its output, inspecting the parameter settings of the tool.
Inspecting the parameter values of this model shows that as the number of alternatives increases (and the similarity between the alternatives as well), the drift rate estimate for the correct responses decreases (Fig. 8, middle panel).
For samples with a high autocorrelation time in the primary parameters, we visually inspected the parameter trace.
Progress in structure refinement was evaluated at each stage by the free R-factor and by inspecting stereochemical parameters calculated by the program PROCHECK [23].
Inspecting the parameters and origin coordinates of the different solutions can provide insights into the source of the conflict and thus help in improving the model structure.
In step 5, we visually inspect the parameter space to identify non-negligible system noise terms (entries of ).
Lastly, any complex model can have convergence problems or implementation errors; one must always inspect the parameter estimates for atypical results.
Traffic status is assessed according to these binary relationships or by inspecting only one parameter (like speed) rather than examining all of them.
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