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Then mapping status between TF and TFBS classes was inspected with similar criteria used in the previous section (inspecting correspondence in sequence level).
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We further assessed the relationship between the penton proteins of virophages and PX proteins of Polintons by constructing multiple sequence alignment and inspecting the correspondence between the secondary structure elements among the aligned sequences (Additional file 3: Figure S2).
All we need to do is inspect the correspondence of intention and action given the difficulty of acting on the intention.
In practice, we inspected TF-TFBS correspondence in terms of sequence, structure, and evolution to explore their relationships.
In general this works by either inspecting the models of the resulting formula, which are in correspondence to the extensions of the AF, or deciding whether a formula is satisfiable or unsatisfiable, to solve query-based reasoning.
Figure 6 shows Thet the theoretic and the manually extracted tracks match almost perfectly.
First, the degree of congruence between the mtIGS structure/phylogeny and its nuclear background was visually inspected with the factorial correspondence analysis (FCA) implemented in GENETIX 4.05 [ 97].
We analyzed the documents of the correspondence between the inspecting and inspected organizations in 36 inspections: 18 from specialized care and 18 from primary care.
Stroz Friedberg investigators dug through the opponent's hard drives, inspected the "metadata" of e-mail correspondence and compared paperwork.
(3) Correspondence between TFs and TFBSs was inspected through surveying correlation of conservation score between TFs and their DNA targets.
Two experienced operators visually inspected the "find the biggest" outputs, verifying the anatomic correspondence of each thalamic connectivity-defined subregion among subjects and their accordance with Oxford Thalamic Connectivity Atlas (integrated in FSL, Johansen-Berg et al. 2005; Fig. 2 C).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com