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Next we compared the methylation state of fragments after insertion with that of the matching endogenous sequence (Stadler et al., 2011).
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However, although the intron in the histone H4_2 gene of A. fumigatus has the same insertion site with that in the histone H4_1 gene of N. fischeri, the sequence lengths are so different (24-nt and 243-nt, Table S5).
The site of pin insertion was consistent with that described by Melone [29] and used by Sato et al. [17].
The identification of relative time of insertion is grounded in the assumption that the process of amelioration alters the island nucleotide composition from the time of insertion to reconcile with that of the host in which it occurs [ 9].
This protocol borrows from the theory of concurrency control for associative and commutative updates, with the addition of a short-term W lock to deal with insertion anomalies that result from some special properties of materialized view updates.
To facilitate a large-scale study of plant gene function using Physcomitrella patens as a model organism, we are developing a collection of Physcomitrella plants with insertion mutations that affect a wide variety of developmental, morphological and physiological characteristics.
SINA offers three choices for dealing with insertions that cannot be accommodated by the reference MSA: (i) The insertion may be shortened as required by erasing bases.
The switch's insertion loss compares favorably with that of 50/50 fiber couplers, which typically have insertion losses of 3.4 dB (excess loss of 0.4 dB).
This experiment also yielded the largest number of clones with insertions that exhibited (wildtype) dC at position 2537.
We show that the LIC has a Ras-like fold with insertions that distinguish it from Ras and other previously described G proteins.
Although our current HangOut procedure does not offer a comprehensive solution to the multidomain problem, it addresses a special case of domains with insertions that represent the major source of profile corruption when PSI-BLAST is initiated with single, discontinuous domain queries.
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