Sentence examples for inserted domain from inspiring English sources

A warning is also issued if the alignment includes insertions larger than 50 residues that might correspond to an inserted domain or deletions larger than 20 residues.

Alternatively, the extensions could result from a domain insertion event near the termini of an ancestral domain (fig 1b blue inserted domain splits pink ancestral domain), producing a sequence discontinuity in the ancestral domain (fig 1b blue segment splits pink segment).

Apparently, the presence of an inserted domain within the AvrB β-hairpin, combined with an alteration of several active site motif residues hinders sequence recognition.

Submitting an AvrB sequence that lacks the inserted domain to a fold-recognition meta-server (http://meta.bioinfo.pl) identifies fic domain structures as top hits with 3D-Jury scores [24] ranging from 48.83 for 3cuc to 60.83 for 2qc0 (scores correspond to approximately 50 60 correctly predicted residues [25]).

The monophyly of this clade is additionally supported by the presence of a distinctive inserted domain which seems to be a derived shared character.

The single exception is probably due to distant homology, since both the host and inserted domain represent similar doubly wound Rossmann folds (Supplementary Fig. S5).

The DdRp subunits of remaining bacteria, which comprise Group II, lack these inserts, although some additional inserted domains are present in individual lineages.

We define these regions as composite domains although they are sequence discontinuous but do not contain inserted domains.

Our adherence towards modular domain definitions ensured sequence continuity for individual domains; unless additional inserted domains also were present (except for composite domains described later in this section).

The function of these inserted domains is unclear.

Furthermore, the inserted domains do not parallel each other within or across subunits.