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The main inputs of the module are gamma-ray (GR) log, bulk density; neutron and resistivity logs.
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The input of the module is the output voltage of the solar panel, and the output of it is the normal voltage.
Therefore, in any particular case, many of the anatomical inputs to the module may remain silent and can safely be ignored.
Firstly, the PS algorithm is designed to choose the most reasonable inputs of the adaptive module.
The energy minimization of the time-average structure used "NCYC = 50" and other default inputs of the SANDER module of AMBER 5 [45], respectively.
NMA used (1) a dielectric multiplicative constant of 80.0, (2) a nonbonded cut-off of 12 Å, and (3) defaults for other inputs of the NMODE module.
NMA used (1) a dielectric multiplicative constant of 80.0, (2) a nonbonded cut-off of 12 Å, and (3) defaults for other inputs of the NMODE module of the AMBER 8 program [28].
Energy minimization used (1) 106 steps of energy minimization, (2) a dielectric multiplicative constant of 80.0, (3) the steepest descent or conjugate gradient method, (4) a nonbonded cut-off of 12 Å, (9) a 10−7-kcal/(moleÅ) cut-off for the root-mean-square of the Cartesian elements of the gradient, and (10) defaults for other inputs of the SANDER module of the AMBER 5 program [28].
Energy minimization used (1) 106 steps of energy minimization, (2) a dielectric multiplicative constant of 80.0, (3) the steepest descent or conjugate gradient method, (4) a nonbonded cut-off of 12 Å, (9) a 10−7-kcal/(moleÅ) cut-off for the root-mean-square of the Cartesian elements of the gradient, and (10) defaults for other inputs of the SANDER module.
The transition state structures were obtained by using (1) 105 steps of energy minimization, (2) a flag to save coordinates at every step of the energy minimization, (3) initial minimization step length of 0.01 Å, (4) 200 eigenvectors, (5) the ordering of the "true" vibrational normal modes of ≤200, and (6) defaults for other inputs of the NMODE module.
3. Remaining variables were lumped into switching modules SM s s ∈ 1,..., 3, such that one variable was functioning as input to the module, a combination of variables as output, and the steady-state input/output behaviour were in the form of a monotonic function with a sigmoid kind of shape.
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