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These promoter sequences, and the plant motif database generated from the above website, were used as input to a program called Promoter Integration in Microarray Analysis (PRIMA v1.0) [43].
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Results serve as input to a computer program that calculates the Bacon anisotropy factor (BAF) and orientation parameter (R).
The resulting formalization ARCS together with a candidate plan α and a goal G are given as an input to a logic program.
Position data are input to a computer program that commands the robot's motors to produce a specific force when the fingertip is at a particular position.
This probability matrix then served as input to a second program used to find the "obtained" projection values for this simulated experiment.
The results are outputted as the input to a graphical program TikZ (for the Edmundson wheel and hydrophobic moment), and Pymol scripts (for showing the peptide surface).
Data pertaining to these schedules is input to an integer programming package as package parameters.
To generate a CIF without intensity data for other purposes, e.g. for input to a molecular graphics program, the keyword NOHKL may be used in the SHELXL ACTA instruction.
The typical input to a motif discovery program under the HD model includes a pair (ℓ, e), which describes the length of the consensus and the maximum substitutions allowed in the occurrences, respectively.
The most straightforward way is to provide it as input to a motif discovery program that supports such additional information, for instance, PRIORITY (Narlikar et al., 2006) or MEME version 4.2+ (Bailey et al., 2010).
Finally a multiple alignment of each orthologue group was used as input to hmmbuild, a program from the HMMER package, version 3.0 [ 79].
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