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However, the fact that the proportions of helix and strand in the Fout100 selected models are not greater than those in the input predictions is suggestive that the Rosetta energy function does not excessively bias toward structured elements.
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Input prediction model, validation method.
Finally, input prediction model built before with the test data to obtain the prediction error.
Our algorithm takes as input the predictions of all pipelines and for each gene merges its predictions into a vector of scores denoted as the gene's combined profile.
In greedy optimization [32], the cross-validated RMSE is optimized using a linear combination of input model predictions.
Note that we also trained a method that used as input only predictions from NORSnet, DISOPRED2, PROFbval, Ucon and sequence profiles without using any other sequence properties.
Used as an input to prediction models, the parameters provide helpful information for system design and optimization, but not general predictions of system usability and acceptability.
The computation of the differences cancels out the activity of units where input and prediction match (explains away), and transmits the activity of those units where input and prediction mismatch (cf. Figs 1 and 2).
Theories like predictive coding propose that lower-order brain areas compare their inputs to predictions derived from higher-order representations and signal their deviation as a prediction error.
Since GLEAN weighs different sources of gene prediction evidence based on agreement among sources, without a priori information on the quality of individual input gene prediction sets, the choice of input datasets impacts the results.
Using the 533 gene probes as input to Prediction Analysis of Microarrays (PAM), 27 gene probes were found to optimally predict treatment with tPA (Additional File 3).
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