Sentence examples for input files needed from inspiring English sources

When using AutoDock4 the input files needed for the project include: the protein input file (in pdbqt format), ligand input files (pdb, mol or pdbqt file format) and atom grid maps.

These input files need not be ordered in any way, although the building times are much shorter using sorted input since ordering reduces the time used to position the physical heads on the hard drive by the underlying file system.

The production of a KLSYN88 input file needs considerable time if performed manually.

The input file needs an ENSEMBL transcript ID and a sequence snippet (the immediate upstream and downstream sequence from the query site) for each SNP.

SD performed manual annotation of the genome, completed comparisons between original JGI genome annotation and the improved version used for modeling and produced all files needed as input for modeling.

It does not contain any executables, default input files and parameters needed to run the workflow.

Application and job specific information is supplied by the user, including the number of input files and the needed database.

Besides the original bisulphite reads, we need other input files: a compressed version of the reference genome, a compressed version of the original reference genome with all the Cs converted to Ts (Genome_CT) and another compressed version with all the Gs converted to As (Genome_GA).

The user simply needs to upload input files and run the workflow through a web interface.

This scheme also presents: (A) the steps need to prepare the input files before launching MOLA and (B) the steps automated by MOLA.

OrthoCluster needs two types of input files (Additional file 11, Figure S8): a genome file and a correspondence file.