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These generated multi-conformational files were used as input database for performing Rapid Overlay of Chemical Structures (ROCS) [ 10] similarity search.
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For further investigating the sources of redundancy we calculated the correlations of scores from the input databases for the portion of the redundant data (Table 2).
Systematic estimates for the causes of neonatal deaths in 192 countries were undertaken by the CHERG based on vital registration data for 45 countries (N=96,797 deaths) and modelled estimates for 146 countries (input database of N=13,685 deaths).
All proteins in the input database are scanned for the shortest interaction paths to the fixed protein, and all of the shortest PPI paths from the fixed protein to each of the relevant proteins are outputted.
For each input database, reads are aligned using bowtie2 [ 29] v2.1.0 or above with the '--very-sensitive-local' and '-a' settings, and all alignments are reported to a file in SAM format.
For a program π and an input database D, we often write π (D ) instead of D ∪ π.
Table 5 List of input database SSl.
These alignments were then used as input for PSI-BLAST using the default parameters [ 22], with the larger dataset of 102 bacterial genomes as the input database.
The CTS input databases are renewed monthly for new DB updates (e.g. HMDB, LipidMaps, KEGG).
Web based E-learning software systems typically involve a dynamic website (web pages whose contents change in accordance with user selections or inputs), a database for storing references to lecture notes (both videos and texts), assignments, and question banks etc., connected through the network to the client computing node.
This objective requires a substantial generalization of methods utilized for ex post analysis of input-output databases for past years.
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