Sentence examples for input aligned from inspiring English sources

The input aligned sequence files were updated within DnaSP to identify coding regions in the alignment based on the annotated D. pseudoobscura genome (version R2.27).

Taking as input aligned reads, Control-FREEC constructs copy number and B-allele frequency profiles.

AnyExpress [ 8] accepts as input aligned data, removes undesirable probes, such as sequence repeats, and generates a target-by-sample text file.

Since we only consider the alleles at SNP loci in the SIH problem, the input aligned fragments are encoded as an m × n SNP matrix M [ 15, 16, 25], where m is the number of fragments and n the number of SNP loci.

Control-FREEC takes as an input aligned reads, then constructs and normalizes the copy number profile, constructs the B-allele frequency (BAF) profile, segments both profiles, ascribes the genotype status to each segment using both copy number and allelic frequency information, then annotates genomic alterations.

Stakeholders also provided input that aligned with Andragogical principles.

The sequence reads for GFP and Input were aligned to the reference mouse genome (mm9, build 37) using Bowtie 2 software (version 2.2.2) [ 45].

The input is aligned sequence data in base space stored in the SAM/BAM format (Li et al., 2009) from a tumour normal pair.

A set of mimotopes obtained above (including 6 dodecapeptides and 5 heptapeptides) was input and aligned with all parameters as defaults.

ORA takes as input reads aligned on a reference genome using software like PASS [ 49], or TopHat [ 53] which is based on Bowtie for reads alignment [ 54].

The sequence tags for RNAPII Ser2P and Ser5P and Input were aligned to the human genome (hg19) using Bowtie [ 31] software.