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An algorithm that can identify the initiation sequence for the hole-by-hole blast is developed from the Voronoi diagram.
We designed a cell culture-based system to test the hypothesis that recombination events during HIV-1 replication would be more frequent near the dimerization initiation sequence (DIS).
The methods like wave superposition, changing initiation sequence (CIS), and dividing a single blast (DSB) into two are introduced in detail.
Then the opened H1 will open the hairpin structure of hairpin probe 2 (H2), and in turn, the opened initiation sequence of H2 continues to open H1.
This problem was long identified by Harel and we propose to follow his solution: extend sequence diagrams with a "prechart", i.e. single out the initiation sequence of the protocol.
In this assay, the hairpin structure of aptamer is opened after binding with targets, and the initiation sequence could be exposed to hairpin probe 1 (H1) to open its hairpin structure.
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Using BIMAS ProScan software [ 12], we identified putative transcription initiation sequences (for example, TATA or initiator elements) within the proximal sequences, which can be indicative of promoters.
The resultant crack types, crack initiation sequences and the overall crack pattern were different under different loading conditions.
(4) Near the 3' end of TAGIT is the gfp gene, which also lacks translational initiation sequences.
This was not previously possible due to the highly species-dependent nature of the available translation initiation sequences.
However, it is still not understood how replication timing as well as initiation can be very specific and highly regulated and yet apparently not dependent on specific replication initiation sequences.
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