Exact(5)
Transcription initiation motifs were searched manually.
Further, protein-coding genes are preceded by potential Shine Dalgarno translation initiation motifs.
The primary translational regulatory elements in 5'UTRs include translation initiation motifs [ 11], upstream start codons (uAUGs), and upstream open reading frames (uORFs) [ 12, 13].
In addition, matreshkaM nucleotide sequences were scanned for consensus Kozak translation initiation motifs [ 14, 15], to help determine whether leaky ribosomal scanning [ 16] may be occuring.
The direct repeats appeared to be LTRs, and included the promoter initiation motifs CAAT (positions 347 350) and TATA (positions 111 114 and 216 219), transcriptional signals for RNA polymerase II.
Similar(3)
To examine its activity as a translational initiation motif we inserted the TISU element downstream to the T7 promoter and upstream to GFP with its ATG in frame with the GFP ATG.
This region can be easily identified by the occurrence of the helix initiation motif.
This leads to an in-frame deletion in a critical region within the helix initiation motif.
Related(1)
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