Sentence examples for initial alignments from inspiring English sources

Indeed, in Figure 4, the down-left tail point of each ROC curve (i.e. corresponding to threshold τ = 0.98) always has highest tpr (y-axis) for trimmed alignments than for initial ones; this shows that a larger proportion of true branches with BioNJ bootstrap-based confidence values >0.98 is observed with trimmed alignments than with initial alignments.

In the first round of alignment, SATé-Prank [ 14] was employed to obtain the initial alignments, which were used to identify the aberrant over-aligned and under-aligned sequences.

The approach in principle is very similar to the initialization step of CMfinder to build the initial alignments.

These initial alignments were used to create HMMs, which were in turn used to re-align the full protein sets.

Point-based registrations, using either rigidly attached markers or anatomical landmarks as fiducials, served as initial alignments for surface-based registrations.

Three initial alignments of the amino acid sequence of the TSHR TMD (or the FSHR and LHR TMDs) with the previous alignments of GPCRs homologues were obtained using the program ClustalW.

The initial alignment (before removal of ambiguously-aligned regions) is provided in Additional file 1.

Amino acids were aligned with ClustalW [18] and this initial alignment edited manually in MacClade 4.08 (included as supporting File S1) [19].

Generally, the initial alignment is divided into coarse and fine alignment.

However, the conventional methods need several minutes to complete the initial alignment.

Some new techniques for initial alignment of strapdown inertial navigation system are proposed in this paper.