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The initial alignment (before removal of ambiguously-aligned regions) is provided in Additional file 1.
Amino acids were aligned with ClustalW [18] and this initial alignment edited manually in MacClade 4.08 (included as supporting File S1) [19].
However, the conventional methods need several minutes to complete the initial alignment.
Some new techniques for initial alignment of strapdown inertial navigation system are proposed in this paper.
In this paper, the problem of initial alignment for Inertial Navigation System (INS) is discussed.
Generally, the initial alignment is divided into coarse and fine alignment.
A feature matching scheme is first adopted to find a coarse initial alignment between two meshes.
An improved two-position initial alignment model for strapdown inertial navigation system is proposed.
We present an algorithm that it is fast, insensitive to initial alignment and tolerates very low overlap.
The additional sensor will result in an extra burden for the initial alignment process and design cost.
It internally uses BLAT to perform the initial alignment of the protein sequences against the genome followed by refinement of hits to determine the exact splicing borders and to obtain the final gene structure.
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