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For the regional HA datasets, phylogenetic trees with sampling date information were inferred by using BEAST version 1.6.2 (26 ) and a relaxed molecular clock (uncorrelated lognormal).
Those haplotypes that were unsolved using family information, were inferred using the E-M algorithm under the restriction of family information (Abecasis et al. 2001; Yu et al. 2005).
Positively selected genes and d N/d S ratio information were inferred using the codeml Branch-Site model of PAML at a 1% level of significance with respect to false discovery rate (FDR) and with Bayes Empirical Bayes (BEB) support greater than 95%.
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The position change information is inferred from the center of laser spot at CCD camera using the Fourier series method.
In MetabolicTinker [28], missing directional information is inferred from (Delta G.
The lithological information was inferred from unpublished well log data from National Iranian Oil Company NIOCC).
In the latter type, New information is inferred from the table, thereby constituting intersemiotic enhancement relation.
From the raw data we obtained an undirected graph consisting on 3,248,358 nodes (the routers) connected by 14,083,946 edges; 81.6% of the nodes also contain information about their Autonomous System (AS) affiliation (for a description on how this information was inferred, consult [17] and the CAIDA page [18]).
In other words, New information was inferred from the graph: e.g. in period 4 and 5 "revenue increased which is a good predictor that Alec is performing well due to the changes and actions that were taken in periods 4 and 5".
Functional information was inferred through prediction of gene function.
Secondary structure information was inferred using the SSTRUC program available from the JOY package.
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