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The coefficient of correlation for each individual gut environmental factor was calculated using the Spearman's rank correlation coefficient, and the correlative information was clustered individually by HCA to seek the covariation factor(s) that related to the induction of faecal IgA production (Fig. 4).
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Pixels with similar color and position information are clustered.
In other words, the image features are clustered into latent variables and then, simultaneously, the annotated auxiliary information is clustered in to the same latent variables.
Also, the contextual information is clustered through a soft decision tree structure with the total number of L leaves partitioning the contextual factor space through the membership functions.
All SLAF pair-end reads with clear index information were clustered based on sequence similarity.
Whenever possible the parental allele inherited by each child is determined, and this information is clustered into genomic blocks of presumed shared inheritance to obtain genome-phasing information.
All SLAF pair-end reads with clear index information were clustered according to sequence similarity, which was detected by BLAT (−tileSize = 10 –stepSize = 5) [ 39].
All SLAF pair-end reads with clear index information were clustered based on sequence similarity as detected by BLAT [ 43] (-tileSize = 10 -stepSize = 5).
All SLAF pair-end reads with clear index information were clustered based on sequence similarity by BLAT (tileSize = 11, stepSize = 11, minScore = 30).
All SLAF pair-end reads with clear index information were clustered based on sequence similarity, as detected by BLAT (−tileSize = 10 –stepSize = 5) [ 39].
All pair-end reads generated from SLAF-seq (with clear index information) were clustered according to sequence similarity, which could be inferred from one-to-one alignment by BLAT (-tileSize = 10 -stepSize = 5).
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