Because genes on this custom array were highly enriched for herbivory-related genes, we used a Q-value threshold of 0.10 to infer statistically significant differences among treatments.
Because this custom array is focused on genes that were known a priori to be induced by herbivory, we used a Q-value threshold of 0.10 to infer statistically significant differences among treatments.
We next analyzed the full and sampled datasets with DESeq, a variance-analysis package that uses a model based on the negative binomial distribution to infer statistically significant differences in gene-expression from RNA-Seq data [ 32].
The F Ratio value calculated from ANOVA: single factor is lesser than 1 and F Ratio is lesser than F Crit, in both the experiments, inferring no significant difference between the three pertained methods.
A level of p < 0.05, family-wise corrected for multiple comparisons was the a priori set statistical threshold to infer significant effects from VBM. Baseline comparison of TEFR09 participants and controls revealed no significant differences regarding GM brain volume.
A P value <0.05 was inferred significant.
Customization requirements are inferred from the significant differences observed between empirically determined groups.
Letters indicate significant differences inferred by a Friedman signed rank test p < 0.05.
For most RNAi phenotypes inferred, there were no significant differences between the numbers of polypeptides in the two species and the numbers of proteins in C. elegans that exhibited those phenotypes.
In the case of Alphaproteobacteria, around 77% of the gene trees inferred from SGF manifested no significant differences with the proposed supertree, which was inferred from all the gene trees, and 76 gene trees were identical to this supertree [ 4].
We did not test for the association between the CONSORT score in adopters and non- or late adopters since every additional analysis increases the likelihood of a type I error, i.e. incorrectly inferring that there is a significant differences when there is no such difference.
