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After the MCMC, they use a special statistic, called the B-Statistic, to infer statistical significance from the hits sampled in MCMC.
At the end, it uses a special statistic, called the B-Statistic, to infer statistical significance from the hits sampled in MCMC.
Broad sense repeatability is most often inferred from the statistic R (the intraclass correlation, or narrow sense repeatability).
Second, a QTL was inferred by computing a statistic representing the relative contribution of variation in window breeding value compared to variation in genomic breeding value.
Following Robust Multi-array Average (RMA) background correction and quantile normalization using Affymetrix Power Tools, allelic balance at assayed loci within the pools was inferred using the Contrast statistic generated by BRLMM-P, using a K value of 1 (Rabbee and Speed 2007).
Positive selection is inferred when the (2Δλ) statistic is greater than critical values 1) of the Chi square distribution for a degree of freedom of 2 (M1a/M2a. and M7/M8 comparisons) or 2) of a 50 50 mixture of point mass 0 and Chi square (critical values are 2.71 at 5% and 5.41 at 1%; M8a/M8 comparison).
K was inferred using the ad hoc statistic Δ K as in Evanno et al. [ 66].
Gene upregulation means its class-specific upward biased expression pattern, inferred by the rank-sum statistic of the modified Kolmogorov Smirnov test (Yang et al, 2010).
We inferred significance of the test statistic Λ, the likelihood of association between allele frequencies and disease phenotype (1 if individual died, 0 if alive without disease signs) within demes, by comparison with 10 000 random simulations of genotype frequencies for each locus.
To further investigate iMatrix and PPI matrices, we inferred the 701,897 potential peptide antigens with significant statistic from 389 pathogen genomes and modelled the TCR-pMHC interactions using available TCR-pMHC complex structures.
A popular modification of the KS test is to use a signed version of the KS statistic to infer whether the values of one sample are statistically larger than the values of the other.
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Justyna Jupowicz-Kozak
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