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Exact(15)
Individual blast alignments are clustered by linking neighboring alignments derived from the same protein in NR.
Additional file 2 shows individual BLAST results for GHR sequence fragments derived from museum skulls.
One example that our individual BLAST efforts identified was 60 S ribosomal protein L14 (BT060370.1).
The uniqueness of the selected surrogate peptides was confirmed by running individual BLAST search from NCBI website (http://blast.ncbi.nlm.nih.gov/Blast.cgi).nih.gov/Blast.cgi
The aim of these individual BLAST searches was to estimate positions for each read against the reference database sequence.
The annotated cDNA sequences encoding FREPs identified in the PSI-BLAST search were used as queries for individual BLAST search in these EST database.
Similar(44)
This algorithm describes the continuous penetration of individual blasting grains into the coating material and determines residual stresses after micro-blasting.
Recently, Yao et al. [15] studied mtDNA sequence variation in more than 3,500 single normal cells and individual blasts from 18 patients with leukemia and 10 healthy donors.
First, a pseudo multiple-sequence alignment (MSA) of the query and BLAST hit sequences is created by parsing the standard BLAST output: individual BLAST-aligned hit sequences are piled up by positioning each residue relative to its homologue in the query sequence (high scoring pairs [HSP] stacking).
Individual blasts had IC50 as low as 169 nℳ and others as high as 2.2 μℳ.
HCudaBLAST performs almost 1.5 times better than the individual Generic BLAST implementation on Hadoop.
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