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In this paper, we propose a multi-agent system for building indirect alignment between multilingual ontologies.
This indirect alignment agrees with the Galinter alignment to a considerable extent (irRMSD = 2.7 Å).
Based on this indirect alignment, the RMSD for the overall functional template atoms of the catalytic triads is much larger than the one obtained based on the Galinter alignment (2.2 Å vs. 0.5 Å).
As we discussed in Section 3.3.1, each reference provides an indirect alignment between q and d.
As the similarity between q and a reference increases, we expect that the indirect alignment obtained from that reference will approach to the optimal one.
Phase I: using the representations for alignments between (q, r i ) and (r i, d) pairs, our indirect alignment ϕ i between q and d through r i is simply the composition of relations δ i and ψ i.
Similar(51)
T-Coffee calculates pairwise alignments by combining the direct alignment of the pair with indirect alignments that aligns each sequence of the pair to a third sequence.
When the interaction orientations of subunits are conserved between S/D-homologous complexes, these indirect alignments provide a coarse way of validating alignments from direct methods like Galinter and I2I-SiteEngine.
The indirect alignments are estimated by combining every possible pair of pair-wise alignments (i.e. XY + YZ = X − Y − Z).
This fixation aims at maintaining bone alignment through indirect reduction without an open approach to the fracture site.
In a type II alignment, the indirect excitons are first localized at the hetero-interfaces and then recombine.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com