Sentence examples for indicator matrix for from inspiring English sources

We finally replace M by using the Boolean indicator matrix for symmetric nearest neighbors (mil = 1 if genes i and l are symmetric nearest neighbors, or 0 otherwise).

A pan-genome tree was constructed using the gene presence/absence indicator matrix for these genomes and our 16 draft genomes.

Let G j be the n × g j indicator matrix for variable j (j ∈ (1,... q)), with g j the number of categories of variable j.

That is for each j (j = 1,..., q) with G j the n × g j indicator matrix for variable j with g j the number of categories of variable j.

To derive the partial derivative, we begin by substituting the determinant formulation into our volume penalization and arrive at the following calculation: therefore, the gradient of log vol(K) is given by where the eigenvector z d satisfies the equality Qz d = λ d z d and E ij is the indicator matrix for the entry ij.

Its solution produces two matrix factors, G1 and G2, that can be interpreted as the cluster indicator matrices for the first and the second dataset.

Using the cnaGENE function of SWITCHdna, the segment output file was converted into an indicator matrix, where for each sample, each gene's copy state was represented as −1 = loss, 0 = no change, 1 = gain.

To determine subtype-specific CNAs, the segment output file which had arisen from the SBL model and BE procedure was converted into an indicator matrix, where, for each sample, each gene's copy state was represented as −1 = loss, 0 = no change, and 1 = gain.

If all omics studies come from the same cases and, thus, have the same number of cases, one indicator matrix can be generated for each study.

And the nonnegative constraints on cluster indicator matrix H may be an insufficient condition for achieving sparseness in some cases [ 20].

An indicator matrix describes if a specific gene/protein is significantly altered in its expression for a specific case compared to a set of controls.