Red boxes indicate code dependencies of Avogadro, blue boxes indicate plugin API classes, and green boxes inidicate examples of each plugin type.
Blue boxes indicate coding exons; white boxes indicate non-coding exons.
Open boxes indicate non-coding sequences while black boxes indicate coding sequences.
Thin black lines are introns, gray boxes indicate non-coding exons, and blue boxes indicate coding exons.
The italicized entries in Tables 1, 2, 3, and 4 indicate codes presenting same TC Mmin) but different MC Mmin).
The next two digits indicate coding change within the allelic family Ovar-DRA*0101 Ovar-DRA*0101 (OvandDRa *01011) may be used to indicate silent or synonymous substitutions.
CI confidence intervals; Boldface type indicates codes who's codes correctly identified intention type.
*Number in italics indicates coding sequence and number in bold indicates amino acid sequence.
Combined, these findings indicate coding consistency among coders, and provide the administrative data with face validity.
*Boldface type indicates codes that achieved the a priori set threshold of a positive predictive value ≥ 50%.
Nevertheless, pN/pS is significantly smaller for orphans compared to intergenic regions (Mann Whitney test, p<1.0 × 10−15), indicating coding purifying selection acting on orphans.
