The nodes of a given TC are incrementally assembled together where the order is based on bit score and the number of ESTs.
PAVE uses MegaBLAST for the clustering step and CAP3 for assembly, however it assembles incrementally to enforce the mate-pair constraint, bury ESTs, and reduce incorrect joins and splits.
For major groups that have mineralized skeletons, such as gnathostomes, however, the pattern that emerges from the analysis of the fossil record is clear: body plans are assembled incrementally, over millions of years, not in sudden bursts of irreducible complexity.
The trimmed 361,196 high-quality ESTs were used for assembly by the PAVE (Program for Assembling and Viewing ESTs) software package, which incrementally builds unique transcripts (Unitrans) using Megablast for clustering and CAP3 for assembling ESTs [ 103].
Then, for each candidate assembly sequence, the system incrementally builds regrasp graphs and performs recursive search to find a pick-and-place motion in the motion level to manipulate the base object as well as to assemble the other object to the base.
The sequences were assembled iteratively, adjusting the assumed error rate incrementally between 0% and 6%.
In order to increase the numerical robustness as compared to very-high-order classical WENO schemes, the reconstruction dynamically assembles a set of low-order candidate stencils with incrementally increasing width.
Touching progressed incrementally, investigators said.
Agaat releases its effect incrementally.
Incrementally, microscopically, he got better.
