The analysis was carried out using linear mixed models incorporating correlations between sequence changes within the same protein and proteins within the same individual.
ESEM can group the survey items (indicators) into a pre-specified number of factors (in our case, the hypothesized domains), while allowing items to belong simultaneously to different domains, and incorporating correlations between item residuals.
Although the theoretically optimal subset explicitly incorporates correlation between features, our results concur with those of others in suggesting that correlations should be shrunken to zero in settings with many more features than samples.
We were able to incorporate correlations between PAH congeners, but we could not do so for other compounds.
The weight matrix W provides the ability to incorporate array weights if desired (Ritchie et al., 2006) or to incorporate correlations between samples (Smyth et al., 2005).
This result was extended by Yeminy et al. [33], who proposed a generalized formulation, incorporating the correlation between adjacent frequency bins.
High recall and high precision is a positive effect of incorporating the correlation between the EC number and the RDM pattern in the weighed major voting process.
Besides the prognostic value on the SOFA score of gender, age and sepsis, which remained regardless of the joint model used, the treatment effect on either outcome was interestingly modified by incorporating a correlation between the SOFA course and dropouts.
The final analyses will use a mixed effects model to incorporate correlations between the observations made by the same physician.
This new model incorporates the correlation between swarm bubbles velocity and drag coefficient, and combines the petroleum correlations and the drift-flux model to determine the friction pressure gradient.
