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The genome of W619 contains two mph operons for the degradation of 3-hydroxyphenylpropionate (Ferrandez et al., 1997): one complete mhpRABCDFET operon encoding enzymes for the conversion from 3-HTT to acetyl coenzyme A (CoA) and another incomplete cluster consisting of mhpEFD.
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Type II clusters are nothing but incomplete clusters which still play a valuable role to people.
The incomplete clustering of sizes indicates evolutionary plasticity and as a result recurrent insertions and deletions.
The 1,012 incomplete clusters of size 3 become 1,012 single records and 1,012 couples.
The degree of variability of lipid profiles among individuals with monogenic diabetes was considerable as evidenced by the incomplete clustering of particular groups (Figs. 2, 3).
Because of our confidence in the previous steps and the use of the Porter-Jaro-Winkler algorithm, a simple algorithm based on the gain is then used to partition incomplete clusters in complete objects (clusters or isolated records).
By contrast, B. longum E18 genome only contains an incomplete gene cluster for sortase-dependent pili suggesting absence of such structures and B. breve S27 encodes one gene cluster and B. bifidum S17 encodes three complete gene clusters for sortase-dependent pili.
The genome also contains an incomplete pilus cluster that contains a signal peptidase (SSU0450) and sortase SrtE (SSU0453), but lacks pilus subunits and ancillary subunits.
Importantly, further analysis of a large collection of serotype 2 strains indicated that all tested strains of this serotype possessed an incomplete srtE cluster similar to that found in strain P1/7, and that they presented the same or other nonsense mutations in the sbp2 gene encoding the major subunit of the srtBCD cluster [18 and unpublished data].
An incomplete NRPS1 cluster was also identified in the reference strain CS-505.
Other uncommon POMs in the PDB are degradation products of larger POM species like the [Mo3O13]8− anion representing a building block of the Keggin POM and the [V7O19]3− anion, an incomplete metavanadate cluster.
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