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All CDSs, including alternatively spliced forms, were considered for estimation of the average and median CDS lengths.
Gene annotation of these sequences predicted 87 putative genes, including alternatively splicing transcript forms.
Normalization of the cDNA library led to the enrichment of rare transcripts in U. vulgaris, including alternatively spliced mRNAs.
Trinity assembler generates high numbers of putative transcripts, including alternatively spliced isoforms and transcripts from recently duplicated genes which lead to the generation of similar transcripts [ 48].
The Entrez Ids were linked with the Recon 1 transcripts, including alternatively spliced variants, and used to generate a list of potential erythrocyte reactions.
The overexpression of kallikrein-related peptidase 15 (KLK15) transcript variants, including alternatively spliced ones, has been observed to be associated with more aggressive prostate cancer [ 116, 117].
Similar(46)
HCDiff callings presume at least three reads with the variant with both forward and reverse reads included; alternatively the quality scores at the variable positions must be over 20 (or over 30 if a homopolymer of five or more bases is involved).
Here, we show that DNA methylation is significantly enriched in included alternatively spliced exons (ASEs) as compared with excluded ASEs.
The Arabidopsis and rice proteome data include alternatively splicing variants, while all the other proteomes do not.
It was confirmed that the 318 bp product includes alternatively spliced exon 6, whereas the 282 bp product excludes it.
In all models (OLS and Quantile Regression) renal function was included alternatively as a continuous (eGFR) or categorical variable.
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