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He does acknowledge the subtlety of the illusion, and the fact that neither of the two well known near copies include the motif.
Indeed, both fragments of MTA1 and histone H4 include the motif KRAARR and both form analogous contacts to RBBP4.
Predicted TaSK1 and TaSK2 protein sequences include the motif ME YV reported to contain key residues for docking of Bikinin [ 8, 27].
Other motifs that were enriched in both active and inactive binding sites include the motif of TFAP2α that has been reported to be a co-regulator of p63 (Supplementary Table S7).
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Order of Markov model m : the background Markov model is constructed from the input sequences that include the motifs themselves.
Other related variants include the motifs TTAGCTAGCT (zp = 8.2, zn = 18.6) and CTAGCTAA (zp = 5.8, zn = 5.5).
They were found to be around 530 aa in length and include the motifs 0 7 for RT domains of non-LTR retrotransposons (Malik et al. 1999).
Amino acid motifs involved in ligand binding are conserved between tetrapod and teleost homologue receptors and include the motifs W-D, G-W-S and the following amino acids W, P and P.
Subsequent in silico analysis identified transcription factor-binding sites (TFBS) that were over-represented in the HEE open chromatin, including the motif for paired box 2 (PAX2).
Reporter activity was not further decreased in a quadruple mutant that included the motif 1 mutation (Fig. 5B).
Region I also includes the motif S-S---IQ found in C2H2 domains of human/mouse/rat ZNF251, and human ZNF34 and ZNF16.
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