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A plot of the time evolution of the rmsd of the protein α-carbons, in which each trajectory frame was aligned with the initial frame to remove rotational and translational motion, suggested that our preliminary efforts to equilibrate the system prior to our 70 ns simulation were successful.
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In any case, in this little world where there seem to be no others, these complexities take on a disordered fragility, like the flight of a butterfly, in which each person's silently arranged trajectory collides only haphazardly with those of the other.
As a function of time, Figure 3B shows the fraction of CG trajectories in which each TMD is integrated for both the CB mutant (top) and EmrE (bottom).
(B ) Fraction of CG trajectories in which each TMD is integrated, plotted as a function of time for the cotranslationally-biased (CB) mutant (top) and EmrE (bottom).
To determine the angle between Abp1 trajectories and the yeast cell surface, we determined the closest membrane tangent for each Abp1 track, using a binary mask of the yeast cell in which the trajectory was acquired.
As the parameter I increases further, the trajectory leaves the repelling branch sooner, eventually resulting in relaxation oscillations (Figure 1f), in which the trajectory spends O ( 1 ) time near both branches of attracting fixed points of the fast system.
Each time the trajectory passes through the saddle-node of periodic orbits it transitions from the branch of attracting to the branch of repelling periodic orbits of the fast system, but the direction in which the trajectory leaves the repelling branch of periodic orbits varies from one pass to the next.
But what is more noteworthy is the way in which the trajectory required to obtain power affects our most primal instincts.
For parameter values in which the trajectory travels above the stable manifold (into the basin of attraction of the stable node corresponding to the higher firing rate), the system approaches that second stable state.
In a world in which the trajectory of carbon loss could be reasonably well anticipated, this outcome could be avoided in one of two ways.
This means that we expect the trained model to be able to make predictions for all 27 experiments in which all trajectory variances are below the threshold.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com