Exact(1)
Black's last three moves have been criticized in various annotations, yet the odd thing is that the Deep Fritz 12 likes all of them.
Similar(59)
Herein, we report the Triticeae mapped EST database (TriMEDB) – a database providing information on the mapped cDNA markers in barley, along with various annotations, and their homologues in wheat.
Since the genomes examined in this study were annotated by as many as eight different sequencing groups over a span of seven years (Table 1), the lack of standardization in these various annotation schemes appears to be the basis for much of the noise in these gene clusters (I. Toby and D. Dyer, manuscript in preparation).
Coverage of various annotations incorporated in the current version of 3DSwap is as follows: the current version of 3DSwap contains CDD annotations for 97.66% of the protein chains of protein structures compiled in 3DSwap.
Integration site counts in various genomic annotations were compared with matched random controls by the Fisher's exact test.
The numbers of entries with various annotations for the different datasets can be found in Additional file 2: Table S20.
This study is a representative example where individual level data is used to query various annotation databases, which in many countries is strictly regulated by privacy law.
This could be due, at least in part, to the application of various annotation methods used for the ten studied genomes (for example, parameter setup and/or pseudogene definition), leading to differing gene predictions.
The authors emphasized the program feature of annotations in various cited tools and could provide a row in the table for this important feature.
Analysis of the sequence-structure alignments, the annotations in various databases and the literature, allowed us to confidently predict the functions for 6 ORFans.
Additionally, we provide a compilation of the c. 1200 proteins forming the E. coli K-12 cell-envelope-predicted proteome according to different proteomic and bioinformatic tools and their current annotations in various databases, together with an update of previous studies (Rey et al., 2005b; Gardy & Brinkman, 2006) assessing the performance of these tools.
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