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The motifs co-localized in the same transcripts suggesting combinatorial organization of these secretory signals.
To prevent disruption of PUs, these PU-spanned ASE ASE pairs should tend to co-occur in the same transcripts.
These results indicate that AS tends to maintain the intactness of PUs by including both PU-spanned ASEs in the same transcripts.
We thus separately concatenated the PU-overlapped and non-PU-overlapped ASE regions (regardless of the exon boundaries) in the same transcripts for calculations of dN, dS, and the dN /dS ratio.
We thus calculated the proportions of PU-spanned ASE ASE pairs that are either copresent or coabsent in the same transcripts and compared these proportions with the background values (derived from all the ASE ASE exon pairs in our data set).
Similar(55)
In the same transcript, Chevalier told Tokhtakhounov that he was helping "in the name of our friendship".
In addition, we used two amplicons that can occur in multiple copies in the same transcript: one amplicon on the 5' repeat exons (amplicon A) and one amplicon on the 3' repeat exons (amplicon C).
This might indicate a multiple enzymatic restriction in the same transcript.
To obtain the unigene, the paired-end reads were realigned to contigs, which can identify different contigs in the same transcript and ascertain the interval among these contigs.
It is interesting to mention that 16% of protein-coding transcripts contain transposable elements in their sequence and they are transcribed in the same transcript unit.
+ The total percentage of transcripts is higher than 100% as different types of AS events can occur in the same transcript.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com